Loren Data's SAM Daily™

SAMDAILY.US - ISSUE OF AUGUST 13, 2020 SAM #6832
SOURCES SOUGHT

66 -- Illumina DRAGEN Server, Installation, and 1-Year Software License

Notice Date

8/11/2020 8:35:38 AM
 

Notice Type

Sources Sought
 

NAICS

334516 — Analytical Laboratory Instrument Manufacturing
 

Contracting Office

NATIONAL INSTITUTES OF HEALTH NIDA Bethesda MD 20892 USA
 

ZIP Code

20892
 

Solicitation Number

75N95020Q00245
 

Response Due

8/21/2020 8:00:00 AM
 

Archive Date

08/21/2020
 

Point of Contact

Anna Chiang, Phone: 3014965916
 

E-Mail Address

anna.chiang@nih.gov
(anna.chiang@nih.gov)
 

Description

This requirement is for the following: Illumina DRAGEN Server, Installation, and 1-Year Software License. The Illumina Dynamic Read Analysis for GENomics (DRAGEN) Bio-IT Platform provides secondary analysis of NGS data of genomes, exomes, and transcriptomes, including single-cell RNA-Seq. The accelerated onboard CPU carries out faster implementations of analysis steps including BCL conversion, read mapping and alignment, read sorting, duplicate marking, and haplotype variant calling. The objective of the server is to greatly speed up such steps and provide reproducible, reliable, finished data with quality control. The server will connect to NCATS� existing BaseSpace Sequence Hub cloud account to organize projects and catalog past sequencing runs. The DRAGEN Server and on-board software connects to Illumina sequencing machines and performs data preparation and analysis immediately following completion of library sequencing. The server will make raw data transfer to the NIH Biowulf HPC unnecessary, saving time, and standardize data handling pipelines. Currently NCATS has delays in transfer of raw data to local and HPC servers, compounded by delay in manual initiation of the data pipelines. The software license includes capacity to customize pipelines, so that the stock applications can be integrated with existing in-house analysis steps to suit the project.
 

Web Link

SAM.gov Permalink
(https://beta.sam.gov/opp/e7fd826eab7d4cfcbc54f0a9487102d0/view)
 

Place of Performance

Address: Rockville, MD 20850, USA

Zip Code: 20850

Country: USA
 

Record

SN05753861-F 20200813/200811230152 (samdaily.us)
 

Source

SAM.gov Link to This Notice
(may not be valid after Archive Date)

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